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i5k Workspace@NAL
U.S. Department of Agriculture
  1. Genomeannotation
  2. Frankliniella Occidentalis Annotations Fraocc_OGSv1.2

Frankliniella occidentalis annotations fraocc_OGSv1.2

Summary
Type
Genome annotation
Name
Frankliniella occidentalis annotations fraocc_OGSv1.2
Description
The Frankliniella occidentalis Official Gene Set fraocc_OGSv1.2 is an update of OGSv1.1 (https://doi.org/10.15482/USDA.ADC/1504029). OGSv1.1 is an integration of automatic gene predictions from the Baylor College of Medicine's i5k pilot project, with manual annotations by the research community (performed via the Apollo manual curation software, http://genomearchitect.org/). OGSv1.2 was updated from OGSv1.1 (https://doi.org/10.15482/USDA.ADC/1504029) to the coordinates of genome assembly GCF_000697945.3 (https://www.ncbi.nlm.nih.gov/assembly/GCF_000697945.3) using https://github.com/agshumate/Liftoff.
Program, Pipeline, Workflow or Method Name
Liftoff
Program Version
1.6.3
Source Name
Frankliniella occidentalis genome assembly Focc_3.1 (GCF_000697945.3)
Data Source URI

https://i5k.nal.usda.gov/data/Arthropoda/fraocc-%28Frankliniella_occide…
Organism
Frankliniella occidentalis
Database Cross References
Database Accession
Ag Data Commons 1504029