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Social evolution. Genomic signatures of evolutionary transitions from solitary to group living.

    Summary
    Publication Type
    Comparative Study
    Abstract

    The evolution of eusociality is one of the major transitions in evolution, but the underlying genomic changes are unknown. We compared the genomes of 10 bee species that vary in social complexity, representing multiple independent transitions in social evolution, and report three major findings. First, many important genes show evidence of neutral evolution as a consequence of relaxed selection with increasing social complexity. Second, there is no single road map to eusociality; independent evolutionary transitions in sociality have independent genetic underpinnings. Third, though clearly independent in detail, these transitions do have similar general features, including an increase in constrained protein evolution accompanied by increases in the potential for gene regulation and decreases in diversity and abundance of transposable elements. Eusociality may arise through different mechanisms each time, but would likely always involve an increase in the complexity of gene networks.

    Citation
    Kapheim KM, Pan H, Li C, Salzberg SL, Puiu D, Magoc T, Robertson HM, Hudson ME, Venkat A, Fischman BJ, Hernandez A, Yandell M, Ence D, Holt C, Yocum GD, Kemp WP, Bosch J, Waterhouse RM, Zdobnov EM, Stolle E, Kraus FB, Helbing S, Moritz RF, Glastad KM, Hunt BG, Goodisman MA, Hauser F, Grimmelikhuijzen CJ, Pinheiro DG, Nunes FM, Soares MP, Tanaka ÉD, Simões ZL, Hartfelder K, Evans JD, Barribeau SM, Johnson RM, Massey JH, Southey BR, Hasselmann M, Hamacher D, Biewer M, Kent CF, Zayed A, Blatti C, Sinha S, Johnston JS, Hanrahan SJ, Kocher SD, Wang J, Robinson GE, Zhang G. Social evolution. Genomic signatures of evolutionary transitions from solitary to group living.. Science (New York, N.Y.). 2015 Jun 05; 348(6239):1139-43.
    Publication Date
    2015 Jun 05
    DOI
    10.1126/science.aaa4788
    Authors
    Kapheim KM, Pan H, Li C, Salzberg SL, Puiu D, Magoc T, Robertson HM, Hudson ME, Venkat A, Fischman BJ, Hernandez A, Yandell M, Ence D, Holt C, Yocum GD, Kemp WP, Bosch J, Waterhouse RM, Zdobnov EM, Stolle E, Kraus FB, Helbing S, Moritz RF, Glastad KM, Hunt BG, Goodisman MA, Hauser F, Grimmelikhuijzen CJ, Pinheiro DG, Nunes FM, Soares MP, Tanaka ÉD, Simões ZL, Hartfelder K, Evans JD, Barribeau SM, Johnson RM, Massey JH, Southey BR, Hasselmann M, Hamacher D, Biewer M, Kent CF, Zayed A, Blatti C, Sinha S, Johnston JS, Hanrahan SJ, Kocher SD, Wang J, Robinson GE, Zhang G
    Cross Reference
    Database Reference Annotations
    Database Accession
    PMID 25977371
    Analyses
    Name Program Status
    Megachile rotundata gene predictions v1.1 Custom Current
    Dufourea novaeangliae genome assembly ASM127255v1 SOAPdenovo Current
    Megachile rotundata genome assembly MROT_1.0 (GCF_000220905.1) SOAPdenovo Assembler Current
    Melipona quadrifasciata genome assembly Mqua.v1.0 (ASM127656v1) SOAPdenovo Current
    Habropoda laboriosa ASM126327v1 GenBank Annotations unknown Current
    Dufourea novaeangliae Annotations v1.1 Augustus, GlimmerHMM, SNAP, TBLASTN, GLEAN Current
    Melipona quadrifasciata annotations GCA_001276565.1_ASM127656v1 Augustus, GlimmerHMM, SNAP, TBLASTN, GLEAN Current
    Eufriesea mexicana Official Gene Set v1.3 Augustus, GlimmerHMM, SNAP, TBLASTN, GLEAN, LiftOff Current
    Bombus impatiens annotations bimp_OGSv1.1 Augustus, GlimmerHMM, SNAP, TBLASTN, GLEAN Supressed
    Bombus terrestris annotations Bombus_terrestris_v1.4 Augustus, GlimmerHMM, SNAP, TBLASTN, GLEAN Supressed
    Eufriesea mexicana genome assembly ASM148370v1 (GCF_001483705.1) SOAPdenovo Supressed
    Eufriesea mexicana Official Gene Set v1.1 Augustus, GlimmerHMM, SNAP, TBLASTN, GLEAN Supressed